EnhancerDB
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  3. rs189175756[chr1:52030871]
Enhancers that have rs189175756[chr1:52030871]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52027839 52037840 enh360
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Heart
Transcript factors that have rs189175756[chr1:52030871]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52030860 52030876 SOX4 JASPAR yes 28851426
chr1 52030864 52030871 JUN TRANSFAC yes 28851427
chr1 52030865 52030882 RARA JASPAR yes 28851428
chr1 52030865 52030882 RXRA JASPAR yes 28851429
Genes associated with rs189175756[chr1:52030871], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More