EnhancerDB
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Enhancers that have rs189179494[chr5:77880375]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77878525 77914000 enh48956
Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs189179494[chr5:77880375]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77880366 77880386 ESR1 JASPAR yes 63602679
chr5 77880368 77880379 TBX2 JASPAR yes 63602680
chr5 77880369 77880377 TBX15 JASPAR yes 63602681
chr5 77880369 77880377 TBX1 JASPAR yes 63602682
chr5 77880369 77880377 TBX4 JASPAR yes 63602683
chr5 77880369 77880377 TBX5 JASPAR yes 63602684
chr5 77880369 77880382 SMAD2 JASPAR yes 63602685
chr5 77880369 77880387 ESR2 JASPAR yes 63602686
chr5 77880370 77880387 ESR1 JASPAR yes 63602687
chr5 77880370 77880388 ESR2 JASPAR yes 63602688
chr5 77880371 77880386 ESR2 JASPAR yes 63602689
chr5 77880371 77880391 ESR1 JASPAR yes 63602690
Genes associated with rs189179494[chr5:77880375], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More