EnhancerDB
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  3. rs189196879[chr1:173389352]
Enhancers that have rs189196879[chr1:173389352]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs189196879[chr1:173389352]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173389297 173389827 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21351305
chr1 173389338 173389353 FOXA1 JASPAR yes 33197963
chr1 173389339 173389359 RREB1 JASPAR yes 33197965
chr1 173389340 173389352 FOXI1 JASPAR yes 33197966
chr1 173389340 173389360 RREB1 JASPAR yes 33197967
chr1 173389341 173389356 FOXP1 JASPAR yes 33197968
chr1 173389343 173389363 RREB1 JASPAR yes 33197969
chr1 173389344 173389356 FOXI1 JASPAR yes 33197970
chr1 173389344 173389364 RREB1 JASPAR yes 33197971
chr1 173389347 173389368 IRF1 JASPAR yes 33197972
chr1 173389348 173389363 FOXP1 JASPAR yes 33197973
chr1 173389351 173389366 PRDM1 JASPAR yes 33197974
chr1 173389351 173389366 STAT2 JASPAR yes 33197975
Genes associated with rs189196879[chr1:173389352], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More