EnhancerDB
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  3. rs189208396[chr12:120670088]
Enhancers that have rs189208396[chr12:120670088]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 120660005 120685163 enh2636
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs189208396[chr12:120670088]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 120667969 120671313 ZNF274 GTRD no Blood (GM12878) 108063073
chr12 120667969 120671313 ZNF274 GTRD no Blood (GM12878) 108063074
chr12 120668267 120671736 ZNF274 GTRD no Blood (GM12878) 108063082
chr12 120668267 120671736 ZNF274 GTRD no Blood (GM12878) 108063083
chr12 120668349 120671361 ZNF274 GTRD no Blood (GM12878) 108063106
chr12 120668349 120671361 ZNF274 GTRD no Blood (GM12878) 108063107
chr12 120668615 120671246 ZNF274 GTRD no Blood (GM12878) 108063177
chr12 120668615 120671246 ZNF274 GTRD no Blood (GM12878) 108063178
chr12 120668913 120671205 ZNF274 GTRD no Blood (GM12878) 108063182
chr12 120668973 120671187 STAT3 GTRD no Blood (OCI-LY7) 108063184
chr12 120669160 120670144 ZNF274 GTRD no Blood (GM12878) 108063262
chr12 120669262 120670316 ZNF274 GTRD no Blood (GM12878) 108063298
chr12 120669313 120670177 ZNF274 GTRD no Blood (GM12878) 108063305
chr12 120670074 120670095 REST JASPAR yes 124156791
chr12 120670082 120670100 MAFF JASPAR yes 124156792
chr12 120670084 120670095 NRL JASPAR yes 124156793
chr12 120670084 120670099 MAFK JASPAR yes 124156794
Genes associated with rs189208396[chr12:120670088], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More