EnhancerDB
  1. Home
  2. SNP
  3. rs189248395[chr1:226841445]
Enhancers that have rs189248395[chr1:226841445]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 226841173 226841776 vista5362
VISTA
Transcript factors that have rs189248395[chr1:226841445]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226840899 226841559 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387026
chr1 226840899 226841559 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107875884
chr1 226840973 226841569 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387027
chr1 226840973 226841569 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107875885
chr1 226841365 226841675 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21387035
chr1 226841365 226841675 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107875893
chr1 226841428 226841449 IRF1 JASPAR yes 35827971
chr1 226841428 226841449 IRF1 JASPAR yes 118471334
chr1 226841439 226841445 LEF1 TRANSFAC yes 35827973
chr1 226841439 226841445 TCF4 TRANSFAC yes 35827974
chr1 226841439 226841445 LEF1 TRANSFAC yes 118471336
chr1 226841439 226841445 TCF4 TRANSFAC yes 118471337
Genes associated with rs189248395[chr1:226841445], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More