EnhancerDB
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  3. rs189252907[chr17:2777044]
Enhancers that have rs189252907[chr17:2777044]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs189252907[chr17:2777044]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2777036 2777045 SRY JASPAR yes 52780575
chr17 2777041 2777057 POU4F2 JASPAR yes 52780576
chr17 2777041 2777057 POU4F3 JASPAR yes 52780577
chr17 2777043 2777057 POU4F1 JASPAR yes 52780578
chr17 2777044 2777055 CDX2 JASPAR yes 52780579
Genes associated with rs189252907[chr17:2777044], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More