EnhancerDB
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  3. rs189261178[chr17:46068494]
Enhancers that have rs189261178[chr17:46068494]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46058151 46084696 enh4448
Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs189261178[chr17:46068494]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46068426 46069026 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21767323
chr17 46068456 46068976 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21767324
chr17 46068457 46069067 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21767325
chr17 46068475 46068811 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21767326
chr17 46068489 46068494 MYC TRANSFAC yes 54549722
chr17 46068489 46068504 NR2C2 JASPAR yes 54549723
chr17 46068490 46068504 RXRB JASPAR yes 54549724
chr17 46068490 46068504 RXRG JASPAR yes 54549725
Genes associated with rs189261178[chr17:46068494], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More