EnhancerDB
  1. Home
  2. SNP
  3. rs189287624[chr5:79546969]
Enhancers that have rs189287624[chr5:79546969]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 79539202 79550375 enh8515
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs189287624[chr5:79546969]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 79546966 79546975 ZEB1 JASPAR yes 63713090
chr5 79546966 79546981 SCRT1 JASPAR yes 63713091
chr5 79546967 79546977 ID4 JASPAR yes 63713092
chr5 79546967 79546977 TCF3 JASPAR yes 63713093
chr5 79546967 79546977 TCF4 JASPAR yes 63713094
chr5 79546968 79546977 SNAI2 JASPAR yes 63713095
chr5 79546969 79546974 USF2 TRANSFAC yes 63713096
Genes associated with rs189287624[chr5:79546969], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More