EnhancerDB
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  3. rs189299805[chr1:230282468]
Enhancers that have rs189299805[chr1:230282468]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230237385 230313644 enh12770
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 230280348 230284066 vista144
VISTA
Transcript factors that have rs189299805[chr1:230282468]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230282039 230282550 ZNF274 GTRD no Bone Marrow (K562) 21391554
chr1 230282039 230282550 ZNF274 GTRD no Bone Marrow (K562) 107878785
chr1 230282061 230282568 ZBTB33 GTRD no Brain (SK-N-SH) 21391555
chr1 230282061 230282568 ZBTB33 GTRD no Brain (SK-N-SH) 107878786
chr1 230282172 230282527 ZNF274 GTRD no Blood (GM12878) 21391556
chr1 230282172 230282527 ZNF274 GTRD no Blood (GM12878) 107878787
chr1 230282183 230282612 ZNF143 GTRD no Epithelial (MCF-7) 21391557
chr1 230282183 230282612 ZNF143 GTRD no Epithelial (MCF-7) 107878788
chr1 230282460 230282472 INSM1 JASPAR yes 36026474
chr1 230282460 230282472 INSM1 JASPAR yes 71161099
chr1 230282463 230282478 NR2C2 JASPAR yes 36026475
chr1 230282463 230282478 NR2C2 JASPAR yes 71161100
chr1 230282465 230282474 SP1 TRANSFAC yes 36026476
chr1 230282465 230282474 SP1 TRANSFAC yes 71161101
chr1 230282465 230282475 SP1 JASPAR yes 36026477
chr1 230282465 230282475 SP1 JASPAR yes 71161102
chr1 230282465 230282486 ZNF263 JASPAR yes 36026478
chr1 230282465 230282486 ZNF263 JASPAR yes 71161103
chr1 230282467 230282473 MAZ TRANSFAC yes 36026479
chr1 230282467 230282473 MAZ TRANSFAC yes 71161104
chr1 230282468 230282489 ZNF263 JASPAR yes 36026480
chr1 230282468 230282489 ZNF263 JASPAR yes 71161105
Genes associated with rs189299805[chr1:230282468], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More