EnhancerDB
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  3. rs189332420[chr1:10564592]
Enhancers that have rs189332420[chr1:10564592]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10562245 10593475 enh59
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs189332420[chr1:10564592]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10564575 10564595 RREB1 JASPAR yes 26718247
chr1 10564587 10564592 SP1 TRANSFAC yes 26718248
chr1 10564592 10564606 RORA JASPAR yes 26718249
Genes associated with rs189332420[chr1:10564592], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More