EnhancerDB
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  3. rs189369348[chr1:39603399]
Enhancers that have rs189369348[chr1:39603399]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs189369348[chr1:39603399]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39603389 39603400 CEBPB JASPAR yes 28256667
chr1 39603390 39603400 CEBPB JASPAR yes 28256668
chr1 39603390 39603400 CEBPE JASPAR yes 28256669
chr1 39603390 39603400 CEBPG JASPAR yes 28256670
chr1 39603390 39603401 CEBPA JASPAR yes 28256671
chr1 39603394 39603404 ALX3 JASPAR yes 28256672
chr1 39603394 39603404 GSX2 JASPAR yes 28256673
chr1 39603394 39603404 MIXL1 JASPAR yes 28256674
chr1 39603395 39603403 ISX JASPAR yes 28256675
chr1 39603395 39603403 LHX9 JASPAR yes 28256676
chr1 39603395 39603403 LMX1B JASPAR yes 28256677
chr1 39603395 39603403 PRRX1 JASPAR yes 28256678
chr1 39603395 39603403 RAX2 JASPAR yes 28256679
chr1 39603395 39603403 SHOX JASPAR yes 28256680
chr1 39603395 39603403 UNCX JASPAR yes 28256681
Genes associated with rs189369348[chr1:39603399], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More