EnhancerDB
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  3. rs189398957[chr6:88435567]
Enhancers that have rs189398957[chr6:88435567]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 88422133 88444375 enh23401
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs189398957[chr6:88435567]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 88435262 88435578 EBF1 UCSC Txn Factor no Conserved 108540935
chr6 88435562 88435573 ELK4 JASPAR yes 103325357
chr6 88435562 88435573 FLI1 JASPAR yes 103325358
chr6 88435564 88435571 SPI1 JASPAR yes 103325359
chr6 88435564 88435572 EHF JASPAR yes 103325360
chr6 88435564 88435572 FEV JASPAR yes 103325361
Genes associated with rs189398957[chr6:88435567], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More