EnhancerDB
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  3. rs189427144[chr5:173200654]
Enhancers that have rs189427144[chr5:173200654]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs189427144[chr5:173200654]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173200641 173200655 PLAG1 JASPAR yes 67903197
chr5 173200649 173200654 SP1 TRANSFAC yes 67903198
chr5 173200653 173200670 RXRA JASPAR yes 67903199
chr5 173200654 173200660 ZNF354C JASPAR yes 67903200
Genes associated with rs189427144[chr5:173200654], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More