EnhancerDB
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  3. rs189465308[chr11:12825306]
Enhancers that have rs189465308[chr11:12825306]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12804154 12848277 enh13788
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs189465308[chr11:12825306]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12823806 12825399 ZNF274 GTRD no Bone Marrow (K562) 21471855
chr11 12823806 12825399 ZNF274 GTRD no Bone Marrow (K562) 107959369
chr11 12824200 12825330 ZNF143 GTRD no Epithelial (MCF-7) 21471915
chr11 12824200 12825330 ZNF143 GTRD no Epithelial (MCF-7) 107959445
chr11 12824203 12825501 ZBTB33 GTRD no Brain (SK-N-SH) 21471917
chr11 12824203 12825501 ZBTB33 GTRD no Brain (SK-N-SH) 107959447
chr11 12824218 12825424 ZNF143 GTRD no Epithelial (MCF-7) 21471931
chr11 12824218 12825424 ZNF143 GTRD no Epithelial (MCF-7) 107959462
chr11 12824282 12825555 ZNF143 GTRD no Epithelial (MCF-7) 21471953
chr11 12824282 12825555 ZNF143 GTRD no Epithelial (MCF-7) 107959488
chr11 12824288 12825399 ZNF143 GTRD no Epithelial (MCF-7) 21471957
chr11 12824288 12825399 ZNF143 GTRD no Epithelial (MCF-7) 107959492
chr11 12824291 12825403 ZNF143 GTRD no Epithelial (MCF-7) 21471960
chr11 12824291 12825403 ZNF143 GTRD no Epithelial (MCF-7) 107959495
chr11 12824427 12825365 ZBTB33 GTRD no Brain (SK-N-SH) 21471982
chr11 12824427 12825365 ZBTB33 GTRD no Brain (SK-N-SH) 107959518
chr11 12824428 12825478 ZBTB33 GTRD no Brain (SK-N-SH) 21471983
chr11 12824428 12825478 ZBTB33 GTRD no Brain (SK-N-SH) 107959519
chr11 12824510 12825334 ZNF143 GTRD no Epithelial (MCF-7) 21471995
chr11 12824510 12825334 ZNF143 GTRD no Epithelial (MCF-7) 107959531
chr11 12825302 12825307 GATA2 JASPAR yes 37479830
Genes associated with rs189465308[chr11:12825306], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More