EnhancerDB
  1. Home
  2. SNP
  3. rs189480901[chr17:55548536]
Enhancers that have rs189480901[chr17:55548536]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs189480901[chr17:55548536]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55548526 55548536 NKX2-3 JASPAR yes 54958444
chr17 55548527 55548536 NKX2-8 JASPAR yes 54958445
Genes associated with rs189480901[chr17:55548536], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More