EnhancerDB
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  3. rs189484938[chr1:39863777]
Enhancers that have rs189484938[chr1:39863777]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39853990 39867590 enh11763
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs189484938[chr1:39863777]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39863762 39863781 PAX5 JASPAR yes 28273487
chr1 39863765 39863782 PAX1 JASPAR yes 28273488
chr1 39863765 39863782 PAX9 JASPAR yes 28273489
Genes associated with rs189484938[chr1:39863777], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More