EnhancerDB
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  3. rs189562875[chr1:225787424]
Enhancers that have rs189562875[chr1:225787424]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225783583 225807972 enh43160
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung Stomach Muscle (A673) Colon (HCT116) Uterus Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs189562875[chr1:225787424]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225787418 225787430 TFAP2A JASPAR yes 35753366
chr1 225787418 225787430 TFAP2B JASPAR yes 35753367
chr1 225787418 225787430 TFAP2C JASPAR yes 35753368
chr1 225787419 225787430 TFAP2B JASPAR yes 35753369
Genes associated with rs189562875[chr1:225787424], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More