EnhancerDB
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  3. rs189577154[chr1:226851130]
Enhancers that have rs189577154[chr1:226851130]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs189577154[chr1:226851130]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226851123 226851134 E2F4 JASPAR yes 35829510
chr1 226851123 226851134 E2F6 JASPAR yes 35829511
chr1 226851124 226851135 E2F1 JASPAR yes 35829512
chr1 226851124 226851136 E2F8 JASPAR yes 35829513
chr1 226851127 226851139 ZBTB7A JASPAR yes 35829514
chr1 226851128 226851133 SP1 TRANSFAC yes 35829515
Genes associated with rs189577154[chr1:226851130], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More