EnhancerDB
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  3. rs189600983[chr17:871850]
Enhancers that have rs189600983[chr17:871850]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 845785 881195 enh32038
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs189600983[chr17:871850]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 871840 871851 NRL JASPAR yes 52647015
chr17 871842 871862 RREB1 JASPAR yes 52647016
chr17 871844 871855 FOXH1 JASPAR yes 52647017
chr17 871847 871860 SCRT2 JASPAR yes 52647018
Genes associated with rs189600983[chr17:871850], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More