EnhancerDB
  1. Home
  2. SNP
  3. rs189685880[chr15:55515517]
Enhancers that have rs189685880[chr15:55515517]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 55507525 55515978 enh3597
Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs189685880[chr15:55515517]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 55513992 55515571 ZNF143 GTRD no Epithelial (MCF-7) 108139748
chr15 55513992 55515571 ZNF143 GTRD no Epithelial (MCF-7) 108139749
chr15 55515513 55515517 H1TF2 TRANSFAC yes 23494529
chr15 55515513 55515517 NFE TRANSFAC yes 23494530
chr15 55515513 55515517 SRF TRANSFAC yes 23494531
Genes associated with rs189685880[chr15:55515517], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More