EnhancerDB
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  3. rs189748012[chr1:8429656]
Enhancers that have rs189748012[chr1:8429656]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8427225 8493496 enh42
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs189748012[chr1:8429656]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8429645 8429660 SCRT1 JASPAR yes 26544195
chr1 8429649 8429658 SNAI2 JASPAR yes 26544196
chr1 8429649 8429659 FIGLA JASPAR yes 26544197
chr1 8429649 8429659 TCF3 JASPAR yes 26544198
Genes associated with rs189748012[chr1:8429656], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More