EnhancerDB
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  3. rs189789797[chr6:108915595]
Enhancers that have rs189789797[chr6:108915595]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 108896085 108921787 enh23478
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs189789797[chr6:108915595]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 108915580 108915595 FOXP1 JASPAR yes 104181664
chr6 108915580 108915601 IRF1 JASPAR yes 104181665
chr6 108915582 108915597 IRF9 JASPAR yes 104181669
chr6 108915583 108915597 IRF7 JASPAR yes 104181671
chr6 108915584 108915598 STAT1 JASPAR yes 104181672
chr6 108915584 108915599 STAT2 JASPAR yes 104181673
chr6 108915585 108915597 IRF1 JASPAR yes 104181675
Genes associated with rs189789797[chr6:108915595], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More