EnhancerDB
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  3. rs189795379[chr12:125230349]
Enhancers that have rs189795379[chr12:125230349]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs189795379[chr12:125230349]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125229954 125230694 ZNF274 GTRD no Bone Marrow (K562) 21582633
chr12 125229954 125230694 ZNF274 GTRD no Bone Marrow (K562) 108069764
chr12 125230122 125230432 ZNF274 GTRD no Bone Marrow (K562) 21582635
chr12 125230124 125230686 ZNF274 GTRD no Bone Marrow (K562) 21582636
chr12 125230124 125230686 ZNF274 GTRD no Bone Marrow (K562) 108069765
chr12 125230147 125230500 ZNF274 GTRD no Bone Marrow (K562) 21582637
chr12 125230147 125230556 ZNF274 GTRD no Bone Marrow (K562) 21582638
chr12 125230181 125230501 ZNF274 GTRD no Bone Marrow (K562) 21582639
chr12 125230188 125230574 ZNF274 GTRD no Bone Marrow (K562) 21582640
chr12 125230196 125230866 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21582641
chr12 125230196 125230866 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108069766
chr12 125230202 125230478 TCF7L2 GTRD no Colon (HCT116) 21582642
chr12 125230224 125230609 ZNF274 GTRD no Bone Marrow (K562) 21582643
chr12 125230224 125230609 ZNF274 GTRD no Bone Marrow (K562) 108069767
chr12 125230234 125230499 ZNF274 GTRD no Bone Marrow (K562) 21582644
chr12 125230237 125230501 ZNF143 GTRD no Epithelial (MCF-7) 21582645
chr12 125230308 125230904 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21582646
chr12 125230308 125230904 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108069768
chr12 125230320 125230970 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582647
chr12 125230320 125230970 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069769
chr12 125230335 125230825 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21582648
chr12 125230335 125230825 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108069770
chr12 125230339 125230824 ESR1 UCSC Txn Factor no Conserved 108069771
Genes associated with rs189795379[chr12:125230349], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More