EnhancerDB
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  3. rs189823555[chr17:42171470]
Enhancers that have rs189823555[chr17:42171470]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs189823555[chr17:42171470]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42171466 42171477 USF1 JASPAR yes 54386120
chr17 42171466 42171477 USF2 JASPAR yes 54386121
chr17 42171467 42171477 SREBF2 JASPAR yes 54386122
chr17 42171469 42171474 USF2 TRANSFAC yes 54386123
Genes associated with rs189823555[chr17:42171470], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More