EnhancerDB
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  3. rs189855438[chr1:39613200]
Enhancers that have rs189855438[chr1:39613200]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs189855438[chr1:39613200]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39613180 39613201 ZNF263 JASPAR yes 28258486
chr1 39613182 39613203 IRF1 JASPAR yes 28258487
chr1 39613183 39613204 ZNF263 JASPAR yes 28258488
chr1 39613184 39613205 ZNF263 JASPAR yes 28258490
chr1 39613187 39613202 FOXP1 JASPAR yes 28258491
chr1 39613187 39613208 ZNF263 JASPAR yes 28258492
chr1 39613190 39613211 ZNF263 JASPAR yes 28258493
Genes associated with rs189855438[chr1:39613200], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More