EnhancerDB
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  3. rs189879075[chr17:80495349]
Enhancers that have rs189879075[chr17:80495349]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs189879075[chr17:80495349]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80491845 80495445 TCF7L2 GTRD no Colon (HCT116) 21800724
chr17 80491845 80495445 TCF7L2 GTRD no Colon (HCT116) 108312680
chr17 80493363 80495370 TCF7L2 GTRD no Colon (HCT116) 21800725
chr17 80493363 80495370 TCF7L2 GTRD no Colon (HCT116) 108312681
chr17 80495338 80495353 HNF1A JASPAR yes 56371889
chr17 80495348 80495351 MYB TRANSFAC yes 56371890
Genes associated with rs189879075[chr17:80495349], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More