EnhancerDB
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  3. rs189922601[chr1:168438607]
Enhancers that have rs189922601[chr1:168438607]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 168433465 168471139 enh12354
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs189922601[chr1:168438607]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 168438482 168440518 ZNF274 GTRD no Bone Marrow (K562) 21348094
chr1 168438482 168440518 ZNF274 GTRD no Bone Marrow (K562) 107844722
chr1 168438528 168438981 ZNF274 GTRD no Bone Marrow (K562) 21348095
chr1 168438598 168438613 TFAP2A JASPAR yes 32928114
chr1 168438598 168438613 TFAP2C JASPAR yes 32928115
chr1 168438599 168438610 TFAP2A JASPAR yes 32928116
chr1 168438599 168438610 TFAP2B JASPAR yes 32928117
chr1 168438599 168438610 TFAP2C JASPAR yes 32928118
chr1 168438605 168438609 LFA1 TRANSFAC yes 32928119
Genes associated with rs189922601[chr1:168438607], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More