EnhancerDB
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  3. rs189953342[chr12:125212769]
Enhancers that have rs189953342[chr12:125212769]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs189953342[chr12:125212769]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125212487 125212777 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21582399
chr12 125212535 125212795 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582401
chr12 125212541 125212771 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582402
chr12 125212547 125212791 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21582403
Genes associated with rs189953342[chr12:125212769], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More