EnhancerDB
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  3. rs189979404[chr17:56021024]
Enhancers that have rs189979404[chr17:56021024]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 56020686 56021039 vista25271
VISTA
Transcript factors that have rs189979404[chr17:56021024]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56021008 56021026 RARA JASPAR yes 21261616
chr17 56021008 56021026 RARA JASPAR yes 55002838
chr17 56021015 56021033 ESR2 JASPAR yes 21261617
chr17 56021015 56021033 ESR2 JASPAR yes 55002839
chr17 56021017 56021031 CREB3 JASPAR yes 21261618
chr17 56021017 56021031 CREB3 JASPAR yes 55002840
chr17 56021018 56021028 MAX JASPAR yes 21261619
chr17 56021018 56021028 MAX JASPAR yes 55002841
chr17 56021018 56021029 USF1 JASPAR yes 21261620
chr17 56021018 56021029 USF2 JASPAR yes 21261621
chr17 56021018 56021029 USF1 JASPAR yes 55002842
chr17 56021018 56021029 USF2 JASPAR yes 55002843
chr17 56021019 56021029 BHLHE40 JASPAR yes 21261622
chr17 56021019 56021029 BHLHE41 JASPAR yes 21261623
chr17 56021019 56021029 HEY1 JASPAR yes 21261624
chr17 56021019 56021029 HEY2 JASPAR yes 21261625
chr17 56021019 56021029 MAX JASPAR yes 21261626
chr17 56021019 56021029 MLXIPL JASPAR yes 21261627
chr17 56021019 56021029 MLX JASPAR yes 21261628
chr17 56021019 56021029 MNT JASPAR yes 21261629
chr17 56021019 56021029 SREBF2 JASPAR yes 21261630
chr17 56021019 56021029 TFE3 JASPAR yes 21261631
chr17 56021019 56021029 TFEB JASPAR yes 21261632
chr17 56021019 56021029 TFEC JASPAR yes 21261633
chr17 56021019 56021029 BHLHE40 JASPAR yes 55002844
chr17 56021019 56021029 BHLHE41 JASPAR yes 55002845
chr17 56021019 56021029 HEY1 JASPAR yes 55002846
chr17 56021019 56021029 HEY2 JASPAR yes 55002847
chr17 56021019 56021029 MAX JASPAR yes 55002848
chr17 56021019 56021029 MLXIPL JASPAR yes 55002849
chr17 56021019 56021029 MLX JASPAR yes 55002850
chr17 56021019 56021029 MNT JASPAR yes 55002851
chr17 56021019 56021029 SREBF2 JASPAR yes 55002852
chr17 56021019 56021029 TFE3 JASPAR yes 55002853
chr17 56021019 56021029 TFEB JASPAR yes 55002854
chr17 56021019 56021029 TFEC JASPAR yes 55002855
chr17 56021019 56021030 USF1 JASPAR yes 21261634
chr17 56021019 56021030 USF2 JASPAR yes 21261635
chr17 56021019 56021030 USF1 JASPAR yes 55002856
chr17 56021019 56021030 USF2 JASPAR yes 55002857
chr17 56021020 56021030 MAX JASPAR yes 21261636
chr17 56021020 56021030 MAX JASPAR yes 55002858
chr17 56021021 56021026 MYC TRANSFAC yes 21261637
chr17 56021021 56021026 USF1 TRANSFAC yes 21261638
chr17 56021021 56021026 USF2 TRANSFAC yes 21261639
chr17 56021021 56021026 MYC TRANSFAC yes 55002859
chr17 56021021 56021026 USF1 TRANSFAC yes 55002860
chr17 56021021 56021026 USF2 TRANSFAC yes 55002861
chr17 56021021 56021028 USF1 JASPAR yes 21261640
chr17 56021021 56021028 USF1 JASPAR yes 55002862
Genes associated with rs189979404[chr17:56021024], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More