EnhancerDB
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  3. rs190027312[chr1:12611776]
Enhancers that have rs190027312[chr1:12611776]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12597605 12619763 enh11515
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs190027312[chr1:12611776]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12606847 12611860 ZBTB33 GTRD no Lung (A549) 107802126
chr1 12611771 12611776 GATA2 JASPAR yes 26832982
chr1 12611776 12611785 THAP1 JASPAR yes 26832983
Genes associated with rs190027312[chr1:12611776], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More