EnhancerDB
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  3. rs190033733[chr1:173397570]
Enhancers that have rs190033733[chr1:173397570]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs190033733[chr1:173397570]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173397557 173397576 RFX2 JASPAR yes 33199221
chr1 173397561 173397577 RFX2 JASPAR yes 33199222
chr1 173397561 173397577 RFX3 JASPAR yes 33199223
chr1 173397561 173397577 RFX4 JASPAR yes 33199224
chr1 173397561 173397577 RFX5 JASPAR yes 33199225
chr1 173397562 173397581 RFX2 JASPAR yes 33199226
chr1 173397569 173397574 GATA2 JASPAR yes 33199227
chr1 173397569 173397584 STAT2 JASPAR yes 33199228
chr1 173397570 173397585 FOXP1 JASPAR yes 33199229
Genes associated with rs190033733[chr1:173397570], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More