EnhancerDB
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  3. rs190042980[chr2:240183549]
Enhancers that have rs190042980[chr2:240183549]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240159334 240219661 enh6224
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs190042980[chr2:240183549]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240183536 240183549 NFKB1 JASPAR yes 82222740
chr2 240183536 240183549 NFKB2 JASPAR yes 82222741
chr2 240183540 240183560 RREB1 JASPAR yes 82222743
chr2 240183541 240183551 ZNF740 JASPAR yes 82222744
Genes associated with rs190042980[chr2:240183549], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More