EnhancerDB
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  3. rs190049833[chr6:43693269]
Enhancers that have rs190049833[chr6:43693269]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43661268 43695735 enh9137
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs190049833[chr6:43693269]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43692497 43693507 POLR2A UCSC Txn Factor no Conserved 108540313
chr6 43692720 43693320 MYC UCSC Txn Factor no Conserved 108540314
chr6 43692764 43693280 CEBPB UCSC Txn Factor no Conserved 108540315
chr6 43692771 43693298 RUNX3 UCSC Txn Factor no Conserved 108540316
chr6 43692783 43693426 EP300 UCSC Txn Factor no Conserved 108540317
chr6 43693262 43693278 ZNF143 JASPAR yes 101779135
Genes associated with rs190049833[chr6:43693269], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More