EnhancerDB
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  3. rs190198226[chr1:234861907]
Enhancers that have rs190198226[chr1:234861907]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234827105 234875936 enh12795
Bone Marrow (K562) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs190198226[chr1:234861907]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234861285 234861945 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21396668
chr1 234861607 234862248 ZNF143 GTRD no Epithelial (MCF-7) 21396671
chr1 234861607 234862248 ZNF143 GTRD no Epithelial (MCF-7) 107881620
chr1 234861610 234862648 ZNF274 GTRD no Liver (HepG2) 21396672
chr1 234861610 234862648 ZNF274 GTRD no Liver (HepG2) 107881621
chr1 234861638 234862201 ZNF143 GTRD no Epithelial (MCF-7) 21396673
chr1 234861638 234862201 ZNF143 GTRD no Epithelial (MCF-7) 107881622
chr1 234861651 234863663 ZNF274 GTRD no Liver (HepG2) 21396674
chr1 234861651 234863663 ZNF274 GTRD no Liver (HepG2) 107881623
chr1 234861654 234862195 ZNF143 GTRD no Epithelial (MCF-7) 21396675
chr1 234861659 234862323 ZNF274 GTRD no Liver (HepG2) 21396676
chr1 234861659 234862323 ZNF274 GTRD no Liver (HepG2) 107881624
chr1 234861726 234862160 ZNF143 GTRD no Epithelial (MCF-7) 21396677
chr1 234861736 234862166 ZNF143 GTRD no Epithelial (MCF-7) 21396678
chr1 234861757 234862248 ZNF143 GTRD no Epithelial (MCF-7) 21396679
chr1 234861757 234862248 ZNF143 GTRD no Epithelial (MCF-7) 107881625
chr1 234861762 234862160 ZNF274 GTRD no Liver (HepG2) 21396680
chr1 234861764 234862194 ZNF274 GTRD no Liver (HepG2) 21396681
chr1 234861769 234862720 ZNF274 GTRD no Liver (HepG2) 21396682
chr1 234861769 234862720 ZNF274 GTRD no Liver (HepG2) 107881626
chr1 234861903 234861917 IRF7 JASPAR yes 36307948
Genes associated with rs190198226[chr1:234861907], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More