EnhancerDB
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  3. rs190207778[chr12:125229862]
Enhancers that have rs190207778[chr12:125229862]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs190207778[chr12:125229862]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125228930 125229933 AR GTRD no Prostate (PC-3) 21582605
chr12 125228930 125229933 AR GTRD no Prostate (PC-3) 108069734
chr12 125229356 125229932 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21582628
chr12 125229356 125229932 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108069760
chr12 125229397 125229933 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21582629
chr12 125229397 125229933 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108069761
chr12 125229736 125230136 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21582632
Genes associated with rs190207778[chr12:125229862], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More