EnhancerDB
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  3. rs190221986[chr1:19770517]
Enhancers that have rs190221986[chr1:19770517]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs190221986[chr1:19770517]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19770498 19770517 PAX5 JASPAR yes 27190999
chr1 19770501 19770518 PAX1 JASPAR yes 27191000
chr1 19770501 19770518 PAX9 JASPAR yes 27191001
chr1 19770508 19770528 TP63 JASPAR yes 27191002
chr1 19770509 19770527 TP73 JASPAR yes 27191003
Genes associated with rs190221986[chr1:19770517], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More