EnhancerDB
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  3. rs190227649[chr16:3906096]
Enhancers that have rs190227649[chr16:3906096]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 3901576 3926575 enh3861
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs190227649[chr16:3906096]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 3906080 3906101 IRF1 JASPAR yes 9235416
chr16 3906085 3906100 FOXP1 JASPAR yes 9235417
chr16 3906086 3906107 IRF1 JASPAR yes 9235418
chr16 3906090 3906104 STAT1 JASPAR yes 9235420
chr16 3906094 3906105 FOXC1 JASPAR yes 9235421
Genes associated with rs190227649[chr16:3906096], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More