EnhancerDB
  1. Home
  2. SNP
  3. rs190238387[chr19:11204286]
Enhancers that have rs190238387[chr19:11204286]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 11201485 11209555 enh17921
Bone Marrow (K562) Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs190238387[chr19:11204286]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 11202322 11204627 ZNF274 GTRD no Cervix (HeLa-S3) 21849330
chr19 11202322 11204627 ZNF274 GTRD no Cervix (HeLa-S3) 108384259
chr19 11202322 11204627 ZNF274 GTRD no Cervix (HeLa-S3) 108384260
chr19 11202850 11204346 ZNF274 GTRD no Bone Marrow (K562) 21849384
chr19 11202850 11204346 ZNF274 GTRD no Bone Marrow (K562) 108384334
chr19 11203016 11204608 ZBTB33 GTRD no Brain (SK-N-SH) 108384345
chr19 11203018 11204663 ZNF274 GTRD no Bone Marrow (K562) 21849395
chr19 11203018 11204663 ZNF274 GTRD no Bone Marrow (K562) 108384346
chr19 11203083 11204677 ZNF274 GTRD no Bone Marrow (K562) 21849398
chr19 11203083 11204677 ZNF274 GTRD no Bone Marrow (K562) 108384350
chr19 11203100 11204562 TCF7L2 GTRD no Colon (HCT116) 108384352
chr19 11204286 11204304 RARA JASPAR yes 112455573
Genes associated with rs190238387[chr19:11204286], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More