EnhancerDB
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  3. rs190249742[chr6:47212273]
Enhancers that have rs190249742[chr6:47212273]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 47202205 47219001 enh9147
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs190249742[chr6:47212273]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 47212260 47212276 SOX4 JASPAR yes 102014614
chr6 47212261 47212276 SOX21 JASPAR yes 102014615
chr6 47212268 47212277 SOX9 JASPAR yes 102014616
Genes associated with rs190249742[chr6:47212273], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More