EnhancerDB
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  3. rs190343544[chr2:240212748]
Enhancers that have rs190343544[chr2:240212748]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240159334 240219661 enh6224
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs190343544[chr2:240212748]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240212738 240212757 CTCF JASPAR yes 82226792
chr2 240212742 240212752 FIGLA JASPAR yes 82226793
chr2 240212742 240212752 TCF3 JASPAR yes 82226794
chr2 240212743 240212752 SNAI2 JASPAR yes 82226795
chr2 240212744 240212749 USF2 TRANSFAC yes 82226796
chr2 240212746 240212757 GCM1 JASPAR yes 82226797
Genes associated with rs190343544[chr2:240212748], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More