EnhancerDB
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  3. rs190402919[chr5:77880687]
Enhancers that have rs190402919[chr5:77880687]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77878525 77914000 enh48956
Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs190402919[chr5:77880687]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77880680 77880691 YY2 JASPAR yes 63602752
chr5 77880684 77880689 SP1 TRANSFAC yes 63602753
chr5 77880684 77880693 HIC2 JASPAR yes 63602754
chr5 77880687 77880691 LFA1 TRANSFAC yes 63602755
Genes associated with rs190402919[chr5:77880687], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More