EnhancerDB
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  3. rs190423947[chr1:173388306]
Enhancers that have rs190423947[chr1:173388306]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs190423947[chr1:173388306]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173388203 173388879 TEF1 GTRD no Bone (Osteoblast) 21351298
chr1 173388293 173388306 NFKB1 JASPAR yes 33197790
chr1 173388293 173388306 NFKB2 JASPAR yes 33197791
Genes associated with rs190423947[chr1:173388306], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More