EnhancerDB
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  3. rs190431520[chr1:19714712]
Enhancers that have rs190431520[chr1:19714712]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19711685 19745775 enh98
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs190431520[chr1:19714712]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19714704 19714719 STAT1 JASPAR yes 27183990
chr1 19714706 19714717 STAT1 JASPAR yes 27183991
chr1 19714706 19714717 STAT3 JASPAR yes 27183992
chr1 19714712 19714721 NKX3-2 JASPAR yes 27183993
chr1 19714712 19714722 NKX2-3 JASPAR yes 27183994
Genes associated with rs190431520[chr1:19714712], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More