EnhancerDB
  1. Home
  2. SNP
  3. rs190445719[chr11:122539439]
Enhancers that have rs190445719[chr11:122539439]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 122527985 122597555 enh2064
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs190445719[chr11:122539439]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 122539436 122539447 CDX2 JASPAR yes 42016845
chr11 122539437 122539447 MNX1 JASPAR yes 42016846
chr11 122539437 122539448 HOXA10 JASPAR yes 42016847
chr11 122539438 122539447 CDX1 JASPAR yes 42016848
chr11 122539438 122539448 HOXA13 JASPAR yes 42016849
chr11 122539438 122539448 HOXB13 JASPAR yes 42016850
chr11 122539438 122539448 HOXC10 JASPAR yes 42016851
chr11 122539438 122539448 HOXD13 JASPAR yes 42016852
Genes associated with rs190445719[chr11:122539439], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More