EnhancerDB
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  3. rs190465868[chr2:38667209]
Enhancers that have rs190465868[chr2:38667209]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38653105 38683515 enh33236
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Colon (HCT116) Breast Uterus Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs190465868[chr2:38667209]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38667204 38667212 FOXC1 JASPAR yes 73140899
chr2 38667206 38667213 NKX3-1 JASPAR yes 73140900
chr2 38667207 38667218 CDX2 JASPAR yes 73140901
chr2 38667208 38667218 MNX1 JASPAR yes 73140902
chr2 38667208 38667219 HOXA10 JASPAR yes 73140903
chr2 38667209 38667218 CDX1 JASPAR yes 73140904
chr2 38667209 38667219 HOXA13 JASPAR yes 73140905
chr2 38667209 38667219 HOXB13 JASPAR yes 73140906
chr2 38667209 38667219 HOXC10 JASPAR yes 73140907
chr2 38667209 38667219 HOXD13 JASPAR yes 73140908
Genes associated with rs190465868[chr2:38667209], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More