EnhancerDB
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  3. rs190471808[chr1:168450202]
Enhancers that have rs190471808[chr1:168450202]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 168433465 168471139 enh12354
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs190471808[chr1:168450202]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 168450193 168450206 TFAP2A JASPAR yes 32930163
chr1 168450193 168450206 TFAP2B JASPAR yes 32930164
chr1 168450193 168450206 TFAP2C JASPAR yes 32930165
chr1 168450201 168450205 LFA1 TRANSFAC yes 32930166
Genes associated with rs190471808[chr1:168450202], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More