EnhancerDB
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  3. rs190530742[chr17:43251272]
Enhancers that have rs190530742[chr17:43251272]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43246305 43256255 enh4426
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Lung Muscle (A673)
Transcript factors that have rs190530742[chr17:43251272]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43251257 43251276 REST JASPAR yes 54433146
chr17 43251262 43251272 SP1 JASPAR yes 54433147
chr17 43251265 43251274 HIC2 JASPAR yes 54433148
Genes associated with rs190530742[chr17:43251272], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More