EnhancerDB
  1. Home
  2. SNP
  3. rs190557419[chr1:16123723]
Enhancers that have rs190557419[chr1:16123723]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16111145 16132915 enh11541
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs190557419[chr1:16123723]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16123708 16123724 GLIS1 JASPAR yes 27002465
chr1 16123720 16123725 SP1 TRANSFAC yes 27002466
Genes associated with rs190557419[chr1:16123723], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More