EnhancerDB
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  3. rs190561580[chr16:81559332]
Enhancers that have rs190561580[chr16:81559332]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 81542851 81638595 enh16838
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs190561580[chr16:81559332]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 81557541 81559816 ZBTB33 GTRD no Lung (A549) 108209483
chr16 81557567 81559837 ZNF274 GTRD no Liver (HepG2) 21717538
chr16 81557567 81559837 ZNF274 GTRD no Liver (HepG2) 108209484
chr16 81557734 81559712 ZBTB33 GTRD no Lung (A549) 108209488
chr16 81557736 81559387 ZBTB33 GTRD no Lung (A549) 108209489
chr16 81557737 81559788 ZBTB33 GTRD no Lung (A549) 108209490
chr16 81557807 81559932 ZBTB33 GTRD no Lung (A549) 108209492
chr16 81557941 81559779 ZNF143 GTRD no Epithelial (MCF-7) 21717542
chr16 81557941 81559779 ZNF143 GTRD no Epithelial (MCF-7) 108209495
chr16 81557965 81559831 ZBTB33 GTRD no Lung (A549) 108209499
chr16 81557983 81559390 ZNF143 GTRD no Epithelial (MCF-7) 21717543
chr16 81557983 81559390 ZNF143 GTRD no Epithelial (MCF-7) 108209501
chr16 81558081 81559333 ZNF274 GTRD no Liver (HepG2) 21717545
chr16 81558081 81559333 ZNF274 GTRD no Liver (HepG2) 108209503
chr16 81558081 81559363 ZNF274 GTRD no Liver (HepG2) 21717546
chr16 81558081 81559363 ZNF274 GTRD no Liver (HepG2) 108209504
chr16 81558101 81560112 ZNF143 GTRD no Epithelial (MCF-7) 21717548
chr16 81558101 81560112 ZNF143 GTRD no Epithelial (MCF-7) 108209508
chr16 81558102 81560043 ZNF143 GTRD no Epithelial (MCF-7) 21717549
chr16 81558102 81560043 ZNF143 GTRD no Epithelial (MCF-7) 108209509
chr16 81558127 81560078 ZNF143 GTRD no Epithelial (MCF-7) 21717551
chr16 81558127 81560078 ZNF143 GTRD no Epithelial (MCF-7) 108209511
chr16 81558146 81559338 ZNF274 GTRD no Liver (HepG2) 21717552
chr16 81558146 81559338 ZNF274 GTRD no Liver (HepG2) 108209513
chr16 81558199 81560224 ZNF143 GTRD no Epithelial (MCF-7) 21717558
chr16 81558199 81560224 ZNF143 GTRD no Epithelial (MCF-7) 108209521
chr16 81558257 81559334 ZNF274 GTRD no Liver (HepG2) 21717567
chr16 81558257 81559334 ZNF274 GTRD no Liver (HepG2) 108209530
chr16 81558300 81559368 ZNF274 GTRD no Liver (HepG2) 21717570
chr16 81558300 81559368 ZNF274 GTRD no Liver (HepG2) 108209534
chr16 81558315 81559561 ZNF274 GTRD no Liver (HepG2) 21717574
chr16 81558315 81559561 ZNF274 GTRD no Liver (HepG2) 108209538
chr16 81558325 81559742 ZNF274 GTRD no Liver (HepG2) 21717575
chr16 81558325 81559742 ZNF274 GTRD no Liver (HepG2) 108209539
chr16 81558349 81559374 ZNF274 GTRD no Liver (HepG2) 21717578
chr16 81558349 81559374 ZNF274 GTRD no Liver (HepG2) 108209543
chr16 81559332 81559353 IRF1 JASPAR yes 11839790
Genes associated with rs190561580[chr16:81559332], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More