EnhancerDB
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  3. rs190679001[chr17:78652797]
Enhancers that have rs190679001[chr17:78652797]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78617185 78655235 enh4633
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
chr17 78652497 78652856 vista26335
VISTA
Transcript factors that have rs190679001[chr17:78652797]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78652490 78652860 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21797085
chr17 78652490 78652860 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108307147
chr17 78652548 78652818 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108307150
chr17 78652582 78652812 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21797087
chr17 78652582 78652812 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108307152
chr17 78652588 78652812 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21797089
chr17 78652588 78652812 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108307154
Genes associated with rs190679001[chr17:78652797], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More